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Introduction to Simulation Environments for Life Sciences

Formación técnica
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13 Mar 2023
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Barcelona
PATC course organised by the Barcelona Supercomputing Center

Objectives: The course will make the attendants familiar with simulation technologies used in Life Sciences and their specific adaptation to HPC environment

Detailed outline: Introduction to biomolecular simulation; Coarse-grained and atomistic simulation strategies; Automated setup for simulation

HPC specifics: Large scale parallelization, use of GPU’s; Storage and strategies for large scale trajectory analysis

Prerequisites:  Basic knowledge of structural bioinformatics Basic knowledge of parallelization strategies. Material will be provided during the course, students are welcome to provide their own use cases.

Please download and carefully read the following instructions regarding the logistics participants enrolling PATC at BSC are expected to follow.

Learning Outcomes: Setup, execute, and analyze standard simulations in HPC environment

More information in BSC website.